{"id":463,"date":"2013-09-05T02:31:33","date_gmt":"2013-09-05T06:31:33","guid":{"rendered":"http:\/\/zhanxw.com\/blog\/?p=463"},"modified":"2013-09-26T11:21:08","modified_gmt":"2013-09-26T15:21:08","slug":"windows-bioinformatics-tools","status":"publish","type":"post","link":"https:\/\/zhanxw.com\/blog\/2013\/09\/windows-bioinformatics-tools\/","title":{"rendered":"Windows bioinformatics tools"},"content":{"rendered":"<p>Bioinformatics Tools (build for Windows)<\/p>\n<p>1. Tabix (<a href=\"http:\/\/zhanxw.com\/blog\/wp-content\/uploads\/2013\/08\/tabix.exe\">Download<\/a>)<\/p>\n<p>2. Bgzip (<a href=\"http:\/\/zhanxw.com\/blog\/wp-content\/uploads\/2013\/08\/bgzip.exe\">Download<\/a>)<\/p>\n<p>These tools are build using MingW, with necessary changes to source codes:<\/p>\n<ul>\n<li>Use _WIN32 definition to make sure fopen() use &#8220;rb&#8221; to open files, not &#8220;r&#8221;. (fopen is equivalent to _bgzf_open)<\/li>\n<li>Link with zlib-2.1.8<\/li>\n<li>Tested with example data.<\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Bioinformatics Tools (build for Windows) 1. Tabix (Download) 2. Bgzip (Download) These tools are build using MingW, with necessary changes to source codes: Use _WIN32 definition to make sure fopen() use &#8220;rb&#8221; to open files, not &#8220;r&#8221;. (fopen is equivalent to _bgzf_open) Link with zlib-2.1.8 Tested with example data.<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[4,11],"tags":[118,119,117,116],"class_list":["post-463","post","type-post","status-publish","format-standard","hentry","category-code","category-sysadmin","tag-bgzip","tag-bioinformatics","tag-tabix","tag-tools"],"_links":{"self":[{"href":"https:\/\/zhanxw.com\/blog\/wp-json\/wp\/v2\/posts\/463","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/zhanxw.com\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/zhanxw.com\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/zhanxw.com\/blog\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/zhanxw.com\/blog\/wp-json\/wp\/v2\/comments?post=463"}],"version-history":[{"count":0,"href":"https:\/\/zhanxw.com\/blog\/wp-json\/wp\/v2\/posts\/463\/revisions"}],"wp:attachment":[{"href":"https:\/\/zhanxw.com\/blog\/wp-json\/wp\/v2\/media?parent=463"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/zhanxw.com\/blog\/wp-json\/wp\/v2\/categories?post=463"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/zhanxw.com\/blog\/wp-json\/wp\/v2\/tags?post=463"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}